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	<title>~pvital Blog &#187; HPC</title>
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	<link>http://blog.pvital.org</link>
	<description>The crazy thoughts of a tech guy.</description>
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		<title>FISL 2010</title>
		<link>http://blog.pvital.org/2010/07/22/fisl-2010/</link>
		<comments>http://blog.pvital.org/2010/07/22/fisl-2010/#comments</comments>
		<pubDate>Thu, 22 Jul 2010 20:42:39 +0000</pubDate>
		<dc:creator>pvital</dc:creator>
				<category><![CDATA[FISL]]></category>
		<category><![CDATA[HPC]]></category>
		<category><![CDATA[IBM]]></category>
		<category><![CDATA[Linux]]></category>
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		<guid isPermaLink="false">http://blog.pvital.org/?p=106</guid>
		<description><![CDATA[Não deu pra postar antes, mas agora que já até palestrei e estou com tempo livre posso falar um pouco melhor. Ontem eu palestrei no 11o Fórum Internacional de Software Livre, ou FISL 2010. Minha palestra teve como título &#8220;﻿﻿Programação Multicore: Como sobreviver a esta revolução usando o Pinguim?&#8221; e tanto os slides quanto os [...]]]></description>
			<content:encoded><![CDATA[<p>Não deu pra postar antes, mas agora que já até palestrei e estou com tempo livre posso falar um pouco melhor. Ontem eu palestrei no 11o Fórum Internacional de Software Livre, ou FISL 2010. Minha palestra teve como título <strong>&#8220;﻿﻿Programação Multicore: Como sobreviver a esta revolução usando o Pinguim?&#8221;</strong> e tanto os slides quanto os códigos-fonte estão disponíveis para download em [1] e [2], respectivamente.</p>
<p>Fora o nervosismo e calorão que senti, mesmo com a temperatura estando por volta do 10 graus Celsius Porto Alegre, e que achei estranho pois já fiz apresentações para um público mais numeroso, a palestra foi muito legal (pelo menos no meu ponto de vista <img src='http://blog.pvital.org/wp-includes/images/smilies/icon_biggrin.gif' alt=':-D' class='wp-smiley' />  ). O único problema que tive foi com o tempo, pois com os 40 minutos de apresentação estipulados não consegui mostrar na prática os fontes de MPI, PThreads, OpenMP e X10 que havia preparado para a sessão.</p>
<p>Aproveitando que disponibilizei os arquivos pelo DropBox, clique em [3] para criar sua conta lá se ainda não tiver a sua!</p>
<p>[1] ﻿<a title="Slides FISL2010" href="http://miud.in/8sf" target="_blank">http://miud.in/8sf</a><br />
[2] <a title="Códigos FISL2010" href="http://miud.in/8sg" target="_blank">http://miud.in/8sg</a><br />
[3] <a title="Convite DropBox" href="https://www.dropbox.com/referrals/NTYyODM2NjA5" target="_blank">https://www.dropbox.com/referrals/NTYyODM2NjA5</a></p>
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		<title>TOP500, de novo!</title>
		<link>http://blog.pvital.org/2008/11/19/top500-de-novo/</link>
		<comments>http://blog.pvital.org/2008/11/19/top500-de-novo/#comments</comments>
		<pubDate>Wed, 19 Nov 2008 12:34:47 +0000</pubDate>
		<dc:creator>pvital</dc:creator>
				<category><![CDATA[HPC]]></category>
		<category><![CDATA[IBM]]></category>
		<category><![CDATA[Linux]]></category>
		<category><![CDATA[portuguese]]></category>
		<category><![CDATA[Supercomputing]]></category>
		<category><![CDATA[LinkedIn]]></category>

		<guid isPermaLink="false">http://blog.pvital.org/?p=31</guid>
		<description><![CDATA[Novembro chegou, e com ele a SC Conference, a maior conferência internacional para computação de alto desempenho (HPC), redes, storage e análise. Como é de costume nessa conferência, mais uma lista dos 500 mais poderosos supercomputadores, a TOP500, foi lançada e nela mais uma vez o Roadrunner da IBM ficou em primeiro lugar. O interessante [...]]]></description>
			<content:encoded><![CDATA[<p>Novembro chegou, e com ele a <a title="SC08" href="http://sc08.supercomputing.org/" target="_blank">SC Conference</a>, a maior conferência internacional para computação de alto desempenho (HPC), redes, storage e análise. Como é de costume nessa conferência, mais uma lista dos 500 mais poderosos supercomputadores, a <a title="November's 2008 TOP500 list" href="http://www.top500.org/lists/2008/11" target="_blank">TOP500</a>, foi lançada e nela mais uma vez o Roadrunner da IBM ficou em primeiro lugar.</p>
<p>O interessante dessa nova lista foram as outras posições, entre a segunda e a décima, dessa vez dominada pela <a title="Cray Inc." href="www.cray.com" target="_blank">Cray Inc</a>. Diferentemente da última lista (comentada por mim <a title="~pvital blog" href="http://blog.pvital.org/2008/06/19/top500-e-o-uso-do-linux/" target="_blank">aqui</a>), onde a <a title="IBM" href="http://www.ibm.com" target="_blank">IBM</a> tinha cinco dos Top10, dessa vez a Cray Inc. tem quatro delas: #2 &#8211; Jaguar XT5, #7 &#8211; Franklin, #8 Jaguar XT4 e #9 &#8211; Red Storm. As outras posições foram: #3 &#8211; Pleiades (<a title="SGI" href="http://www.sgi.com" target="_blank">SGI</a>), #4 &#8211; BlueGene/L (IBM), #5 &#8211; BlueGene/P (IBM), #6 &#8211; Ranger (<a title="Sun Microsystems" href="http://www.sun.com" target="_blank">Sun Microsystems</a>) e #10 &#8211; Dawning 5000A (<a title="Dawning" href="http://www.dawning.com.cn/en/index.asp" target="_blank">Dawning</a>).</p>
<p>O Brasil tem dois representantes nesta lista. O melhor colocado é um Dell PowerEdge Cluster, chamado de Netuno, do <a title="NCE-UFRJ" href="http://www.nce.ufrj.br/" target="_blank">Núcleo de Computação Eletrônica</a> da UFRJ que ficou na posição <a title="Netuno" href="http://www.top500.org/system/9259" target="_blank">#306</a>, e o seguinte, que ficou na posição <a title="PGS" href="http://www.top500.org/system/details/9725" target="_blank">#363</a>, é um IBM xSeries x3550 Cluster Xeon quad core HT da PGS.</p>
<p>Outro dado interessante é o contínuo crescimento do número de sistemas utilizando Linux. Nesta lista, foram 439 sistemas (acrescimo de 12 com relação a lista anterior) com sistema operacional da família Linux. É o pinguin dominando o mercado <img src='http://blog.pvital.org/wp-includes/images/smilies/icon_biggrin.gif' alt=':-D' class='wp-smiley' /> </p>
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		<title>Top500 and the Linux usage.</title>
		<link>http://blog.pvital.org/2008/06/19/top500-and-the-linux-usage/</link>
		<comments>http://blog.pvital.org/2008/06/19/top500-and-the-linux-usage/#comments</comments>
		<pubDate>Thu, 19 Jun 2008 03:36:48 +0000</pubDate>
		<dc:creator>pvital</dc:creator>
				<category><![CDATA[Cell]]></category>
		<category><![CDATA[english]]></category>
		<category><![CDATA[HPC]]></category>
		<category><![CDATA[IBM]]></category>
		<category><![CDATA[Linux]]></category>
		<category><![CDATA[Supercomputing]]></category>

		<guid isPermaLink="false">http://blog.pvital.org/?p=22</guid>
		<description><![CDATA[Today a new list of the 500 world&#8217;s most powerful supercomputers (Top500) was presented at the 23rd International Supercomputing Conference in Dresden, Germany. This list has a particular issue: the petaflops barrier was broken. The responsible by this fact? Roadrunner, the most powerful supercomputer of the world. Roadrunner, named after the New Mexico state bird, [...]]]></description>
			<content:encoded><![CDATA[<p>Today a new <a title="Top 500 (june/2008)" href="http://www.top500.org/lists/2008/06" target="_blank">list</a> of the 500 world&#8217;s most powerful supercomputers (<a title="Top 500 Supercomputers Site" href="http://www.top500.org" target="_blank">Top500</a>) was presented at the <a title="23rd ISC" href="http://www.supercomp.de/isc08/content/" target="_blank">23rd International Supercomputing Conference</a> in <a title="Dresden, Germany" href="http://en.wikipedia.org/wiki/Dresden" target="_blank">Dresden, Germany</a>. This list has a particular issue: the petaflops barrier was broken. The responsible by this fact? <a title="Roadrunner's Top500 page" href="http://www.top500.org/system/9485" target="_blank">Roadrunner</a>, the most powerful supercomputer of the world.</p>
<p><a title="Roadrunner" href="http://www.lanl.gov/news/index.php/fuseaction/nb.story/story_id/13552/nb_date/2008-06-09" target="_blank">Roadrunner</a>, named after the New Mexico state bird, cost about US $100 million, and was designed and build by IBM at <a title="Los Alamos National Laboratory" href="http://www.lanl.gov/" target="_blank">Los Alamos National Laboratory</a> to the <a title="DOE's NNSA" href="http://nnsa.energy.gov/" target="_blank">Department of Energy’s National Nuclear Security Administration</a>.  It <span><span>is the world’s first hybrid 	supercomputer, designed to <a title="Cell BE" href="http://www.research.ibm.com/cell/" target="_blank">Cell Broadband Engine</a>® works with the </span></span><span><span><a title="AMD Opteron processor" href="http://www.amd.com/us-en/Processors/ProductInformation/0,,30_118_8825,00.html" target="_blank">Opteron</a>®</span></span><span><span> processors from 	<a title="AMD  " href="http://www.amd.com" target="_blank">AMD</a>. A few numbers of Roadrunner:</span></span></p>
<ul>
<li><span><span>connects 6,562 dual-core AMD Opteron® chips as well as 12,240 Cell 	chips (on IBM Model QS22 blade servers),</span></span></li>
<li><span><span>has 98 	terabytes of memory,<br />
</span></span></li>
<li><span><span>is housed in 278 refrigerator-sized, IBM 	BladeCenter® racks occupying 5,200 square feet,</span></span></li>
<li><span><span>has 10,000 connections 	– both Infiniband and Gigabit Ethernet &#8212; that required 55 miles of fiber 	optic cable,</span></span></li>
<li><span><span>weighs 500,000 lbs. </span></span></li>
</ul>
<p><span><span>But other important thing about Roadrunner is its operating system: a Linux version from <a title="Red Hat Linux" href="http://www.redhat.com" target="_blank">Red Hat</a>. All the Top10 most powerful supercomputers have Linux. Four of them have only Linux running: #1 Roadrunner (<a title="IBM" href="http://www.ibm.com" target="_blank">IBM</a>), #4 Ranger (<a title="Sun Microsystems" href="http://www.sun.com" target="_blank">Sun Microsystems</a>), </span></span><span><span>#5 Jaguar (<a title="Cray Inc." href="http://www.cray.com/" target="_blank">Cray Inc.</a>), </span></span>#7 Encanto (<a title="SGI" href="http://www.sgi.com/" target="_blank">SGI</a>), <span><span>#8 EKA (</span></span><a title="HP" href="http://www.hp.com">Hewlett-Packard</a>) and #10 Total&#8217;s SGI Altix (SGI). The rest of them have a kind of mixed system (Linux+something): #2 BlueGene/L (IBM), #3 Argonne Blue Gene/P Solution (IBM), #6 JUGENE Blue Gene/P Solution (IBM) and #9 IDRIS Blue Gene/P Solution (IBM) have SLES9+CNK.</p>
<p>The number of supercomputers with Linux have increased by the years. From the 500 supercomputers of the last list, 427 have Linux and 40 have a mixed system with Linux (UNICOS/Linux, CNK/SLES 9, UNICOS/SUSE Linux and UNICOS/lc). See the official numbers <a title="OS numbers from TOP500(June/08)" href="http://www.top500.org/stats/list/31/os" target="_blank">here</a>. The first time that a supercomputer with Linux appeared in the Top500 list was on June,1998. The development of the Linux usage by the years can be visualized <a title="OS family development of Top500" href="http://www.top500.org/overtime/list/31/osfam" target="_blank">here</a>.</p>
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		<title>Top500 e o uso do Linux</title>
		<link>http://blog.pvital.org/2008/06/19/top500-e-o-uso-do-linux/</link>
		<comments>http://blog.pvital.org/2008/06/19/top500-e-o-uso-do-linux/#comments</comments>
		<pubDate>Thu, 19 Jun 2008 03:35:59 +0000</pubDate>
		<dc:creator>pvital</dc:creator>
				<category><![CDATA[Cell]]></category>
		<category><![CDATA[HPC]]></category>
		<category><![CDATA[IBM]]></category>
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		<category><![CDATA[Supercomputing]]></category>

		<guid isPermaLink="false">http://blog.pvital.org/?p=23</guid>
		<description><![CDATA[Hoje uma nova lista dos 500 mais poderosos supercompudores do mundo (Top500) foi apresentada na 23a International Supercomputing Conference em Dresden, Alemanha. Esta lista tem um tópico particular: a barreira do petaflop foi quebrada. O responsável por isso? Roadrunner, o supercomputador mais poderoso do mundo. Roadrunner, nome de uma ave do estado do Novo Mexico [...]]]></description>
			<content:encoded><![CDATA[<p>Hoje uma nova <a title="Top 500 (june/2008)" href="http://www.top500.org/lists/2008/06" target="_blank">lista</a> dos 500 mais poderosos supercompudores do mundo (<a title="Top 500 Supercomputers Site" href="http://www.top500.org" target="_blank">Top500</a>) foi apresentada na <a title="23rd ISC" href="http://www.supercomp.de/isc08/content/" target="_blank">23a International Supercomputing Conference</a> em <a title="Dresden, Germany" href="http://en.wikipedia.org/wiki/Dresden" target="_blank">Dresden, Alemanha</a>. Esta lista tem um tópico particular: a barreira do petaflop foi quebrada. O responsável por isso? <a title="Roadrunner's Top500 page" href="http://www.top500.org/system/9485" target="_blank">Roadrunner</a>, o supercomputador mais poderoso do mundo.</p>
<p><a title="Roadrunner" href="http://www.lanl.gov/news/index.php/fuseaction/nb.story/story_id/13552/nb_date/2008-06-09" target="_blank">Roadrunner</a>, nome de uma ave do estado do Novo Mexico nos EUA, custou cerca de 100 milhões de dólares, e foi projetado e construido pela IBM no <a title="Los Alamos National Laboratory" href="http://www.lanl.gov/" target="_blank">Laboratório Nacional Los Alamos</a> para a <a title="DOE's NNSA" href="http://nnsa.energy.gov/" target="_blank">Departamento de Energia</a>.  Ele é o primeiro supercomputador híbrido do mundo<span><span>, projetado para processador <a title="Cell BE" href="http://www.research.ibm.com/cell/" target="_blank">Cell Broadband Engine</a>® trabalhar em conjunto com o processador </span></span><span><span><a title="AMD Opteron processor" href="http://www.amd.com/us-en/Processors/ProductInformation/0,,30_118_8825,00.html" target="_blank">Opteron</a>®</span></span><span><span> da	<a title="AMD  " href="http://www.amd.com" target="_blank">AMD</a>. Alguns números do Roadrunner:</span></span></p>
<ul>
<li><span><span>conecta 6562 chips dual-core AMD Opteron® bem como 12.240 chips Cell (em servidores blades IBM Modelo QS22),</span></span></li>
<li><span><span>tem 98 	terabytes de memória,<br />
</span></span></li>
<li><span><span>está em 278 IBM 	BladeCenter® racks ocupando </span></span>483.095 m²<span><span>t,</span></span></li>
<li><span><span>tem 10.000 conexões 	– ambas Infiniband e Gigabit Ethernet &#8212; que requiseram 88,5 Km de cabos de fibra óptica,</span></span></li>
<li><span><span>pesa cerca de 227 toneladas. </span></span></li>
</ul>
<p><span><span>Mas um fato interessante sobre o Roadrunner é seu sistema operacional: uma versão de Linux da <a title="Red Hat Linux" href="http://www.redhat.com" target="_blank">Red Hat</a>. Todos os Top10 supercomputadores mais poderosos usam Linux. Quatro deles tem somente Linux: #1 Roadrunner (<a title="IBM" href="http://www.ibm.com" target="_blank">IBM</a>), #4 Ranger (<a title="Sun Microsystems" href="http://www.sun.com" target="_blank">Sun Microsystems</a>), </span></span><span><span>#5 Jaguar (<a title="Cray Inc." href="http://www.cray.com/" target="_blank">Cray Inc.</a>), </span></span>#7 Encanto (<a title="SGI" href="http://www.sgi.com/" target="_blank">SGI</a>), <span><span>#8 EKA (</span></span><a title="HP" href="http://www.hp.com">Hewlett-Packard</a>) e #10 SGI Altix da Total (SGI). O resto possuem um tipo de sistema misto (Linux+alguma coisa): #2 BlueGene/L (IBM), #3 Argonne Blue Gene/P Solution (IBM), #6 JUGENE Blue Gene/P Solution (IBM) e #9 IDRIS Blue Gene/P Solution (IBM) todos com SLES9+CNK.</p>
<p>O número de supercomputadores com Linux tem crescido através dos anos. Dos 500 supercomputadores da última lista, 427 rodam Linux e 40 tem um sistema misto com Linux (UNICOS/Linux, CNK/SLES 9, UNICOS/SUSE Linux and UNICOS/lc). Veja os números oficiais <a title="OS numbers from TOP500(June/08)" href="http://www.top500.org/stats/list/31/os" target="_blank">aqui</a>. A primeira vez que um supercomputador com Linux apareceu na lista Top500 foi em Junho de 1998. O crescimento do uso de Linux através dos anos em supercomputadores pode ser visto <a title="OS family development of Top500" href="http://www.top500.org/overtime/list/31/osfam" target="_blank">aqui</a>.</p>
<p><strong>Update:</strong> Curiosamente, Roadrunner é nome americano do personagem Papa-Léguas da animação <a title="Papa-Léguas e Coiote" href="http://pt.wikipedia.org/wiki/Papa-L%C3%A9guas_e_Coiote" target="_blank">Papa-Léguas e Coiote</a>. Os nomes dos personagens da animação são baseados em nome de animais reais nativos dos desertos do sudoeste americano, o galo-corredor e o coiote.</p>
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		<title>Top500 and Green500 lists</title>
		<link>http://blog.pvital.org/2008/03/01/top500-and-green500-lists/</link>
		<comments>http://blog.pvital.org/2008/03/01/top500-and-green500-lists/#comments</comments>
		<pubDate>Sat, 01 Mar 2008 03:38:25 +0000</pubDate>
		<dc:creator>pvital</dc:creator>
				<category><![CDATA[english]]></category>
		<category><![CDATA[HPC]]></category>
		<category><![CDATA[IBM]]></category>
		<category><![CDATA[Supercomputing]]></category>

		<guid isPermaLink="false">http://blog.pvital.org/2008/03/01/top500-and-green500-lists/</guid>
		<description><![CDATA[A little post that I posted in my IBM internal blog. Ok, everyone has heard about the Top500 list, a twice year list of the sites operating the 500 most powerful supercomputers systems of the world. The first list is commonly announced during the International SuperComputing Conference &#8211; ISC (June), and the second during the [...]]]></description>
			<content:encoded><![CDATA[<p>A little post that I posted in my IBM internal blog.</p>
<p>Ok, everyone has heard about the <a href="http://www.top500.org/">Top500</a> list, a twice year list of the sites operating the 500 most powerful supercomputers systems of the world. The first list is commonly announced during the <a href="http://www.supercomp.de/">International SuperComputing Conference &#8211; ISC</a> (June), and the second during the <a href="http://www.supercomputing.org/">International Conference for High Performance Computing, Networking, Storage, and Analysis &#8211; SC</a> (November).</p>
<p>The first position of the last list (released on November 12th, 2007) is the <a href="http://www.top500.org/system/8968">BlueGene/L System</a>, a joint development of IBM and the Department of Energy&#8217;s (DOE) National Nuclear Security Administration (NNSA) that was installed at DOE&#8217;s <a href="http://www.top500.org/site/2556">Lawrence Livermore National Laboratory</a> in Livermore, Calif. The No. 2 is from IBM too, a <a href="http://www.top500.org/2007_overview_recent_supercomputers/ibm_bluegene_l_p">BlueGene/P</a> system installed in Germany at the <a href="http://www.top500.org/site/649">Forschungszentrum Juelich (FZJ).</a> From the Top10, there are four IBM&#8217;s systems, and 46.6% of the 500 systems are IBM.</p>
<p>And about the <a href="http://www.green500.org/">Green500</a> list, who&#8217;s know it? The Green500 provides a ranking of the most energy-efficient supercomputers in the world and serve as a complementary view to the Top500 list. The first list was announced on November 15th, 2007 at SC07, and we can see the rank <a href="http://www.green500.org/lists/2007/11/index.html">here</a>.</p>
<p>But why is it important to IBM? Because the numbers!! From the first until the 27th position, only the No. 6 is not from IBM. The first five systems are Blue Gene/P Solution, and from the No. 7 until the No. 27 they are eServer Blue Gene Solutions.</p>
<p>This is a clear result of the green concern that IBM is involved.</p>
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		<title>Summary of the 19th SBAC-PAD</title>
		<link>http://blog.pvital.org/2008/02/28/summary-of-the-19th-sbac-pad/</link>
		<comments>http://blog.pvital.org/2008/02/28/summary-of-the-19th-sbac-pad/#comments</comments>
		<pubDate>Thu, 28 Feb 2008 20:55:41 +0000</pubDate>
		<dc:creator>pvital</dc:creator>
				<category><![CDATA[Cell]]></category>
		<category><![CDATA[english]]></category>
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		<category><![CDATA[SBA-PAD]]></category>

		<guid isPermaLink="false">http://blog.pvital.org/2008_02_28/summary-of-the-19th-sbac-pad/</guid>
		<description><![CDATA[Last year I attended the 19th International Symposium on Computer Architecture and High Performance Computing (SBAC-PAD) in Gramado, RS, Brazil. The web page of the event is here. There were very nice presentations like the &#8220;Computational Characteristics of Production Seismic Migration and its Performance on Novel Processor Architectures&#8221; by Jairo Panetta (Petróleo Brasileiro SA, Brazil), [...]]]></description>
			<content:encoded><![CDATA[<p>Last year I attended the 19th International Symposium on Computer Architecture and High Performance Computing (SBAC-PAD) in Gramado, RS, Brazil. The web page of the event is <a href="http://www.sbc.org.br/sbac/2007/">here</a>.</p>
<p>There were very nice presentations like the &#8220;<strong>Computational Characteristics of Production Seismic Migration and its Performance on Novel Processor Architectures</strong>&#8221; by Jairo Panetta (Petróleo Brasileiro SA, Brazil), &#8220;<strong>Impacts of Multiprocessor Configurations on Workloads in Bioinformatics</strong>&#8221; by  Mauricio Breternitz (Intel Corporation, USA) and the Google Keynote presentation.</p>
<p>The event had many parallel Workshops and the most famous of them are the WSCAD (Workshop em Sistemas Computacionais de Alto Desempenho &#8211; Workshop in High Performance Computing Systems). This is a portuguese event, so I think that is not interesting point the presentations here, but there was a good CELL programming short course.</p>
<p>Summarizing the event I can point three things discussed in the keynotes and panels, to solve the problem of the new challenges of parallel and multi-core programming:</p>
<ol>
<li>Use high level programming languages;</li>
<li>Use tools developed to do the work of parallelling the code;</li>
<li>Raise the level of abstraction of the problem.</li>
</ol>
<p>These three points of view are defended by <a href="http://ogun.stanford.edu/%7Ekunle/">Kunle Olukotun</a> (Stanford University), Mauricio Bareternitz (Intel) and <a href="http://charm.cs.uiuc.edu/%7Ekale/">Laxmikant (Sanjay) Kale</a> (University of Illinois at Urbana-Champaign), respectively.</p>
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